Type of resources
Contact for the resource
This dataset contains records of vascular plant species from the Biological Survey of South Australia. Preparation from raw data obtained via AEKOS data portal involved the selection of data fields, the removal of intraspecific taxa (only genus and species used to define individual taxa) and removal of duplicate records and those not determined to species.
This is a collated plant survey data from the Fleurieu Peninsula wetlands (version.2). There is a biological and a spatial component to the dataset.  Biological data: This was collated from several sources, collected over the period 2000-2009 and used in the analyses for the paper <i>Diversity patterns of seasonal wetland plant communities mainly driven by rare terrestrial species</i> (Deane et al - Biodiversity and Conservation, DOI: <em>10.1007/s10531-016-1139-1</em>). Biological data were pre-processed to remove sampling bias (the method is described in the paper). Data are presence-absence of 215 native plant species (i.e., exotic species removed) from 76 seasonal wetlands (size range 0.5 - 35 ha) located on the Fleurieu Peninsula, South Australia (centred on latitude 35.5 °S).  Spatial data: For each of the 76 wetlands a small amount of spatial data is also provided. Area, centroids, elevation and catchment. The data could be of interest for any typical community data analysis (e.g. beta diversity, similarity, assembly), provided only native wetland plant species were of interest. Data were used to model extinction risk, species-area relationships, occupancy distributions and so on.
We generated a total of 2,313,977 16S archaeal raw reads across the 36 replicates (64,277 ± 23,335 SD per replicate). A total of 2,299,955 archaeal sequences (63,888 ± 23,473 SD per replicate) and 1,937 archaeal OTUs (54 ± 20 SD per replicate) remained for further analysis after quality filtering. The OTU data provide information on archaeal flux at an active restoration site at Mt Bold, a water catchment reserve of the Mt Lofty Ranges in South Australia, through a stagger of years and can be used accordingly.
This dataset comprises of new, high precision radiocarbon dates for 20 mainland thylacines and 24 mainland devils. Metadata includes museum accession numbers and origin of specimens. We envision that this dataset could be used in studies of paleo-ecological reconstructions and for estimating extinction time for both devils and thylacines on mainland Australia. This dataset includes the youngest reliable fossil ages for both species on mainland Australia as per the criteria set out in Rodriguez-Rey at al (2015). <i>"Criteria for assessing the quality of Middle Pleistocene to Holocene vertebrate fossil ages."</i> Quaternary Geochronology 30 (2015): 69-79.
We present a High-throughput eDNA dataset of fungi to track functional recovery in ecological restoration in the form of an OTU raw data matrix. We generated a total of 4,993,144 ITS fungal raw reads (118,884 ± 42,210 SD per replicate) across the 42 replicates. A total of 4,955,680 fungal sequences (117,430 ± 42,164 SD per replicate) remained for further analysis after quality filtering. The OTU data provide information on fungal flux at this restoration site through a stagger of years and can be used accordingly.
The authors analyzed a total of 3,002,411 quality-filtered bacterial 16S rRNA gene sequences in the 48 technical replicates across 8 revegetation chronosequence sites, consisting of 3,316 OTUs. Nine bacterial phyla dominated this dataset, including Acidobacteria, Actinobacteria, Bacteroidetes, Chloroflexi, Firmicutes, Gemmatimonadetes, Planctomycetes, Proteobacteria and Verrucomicrobia.The OTU data provide information on bacterial flux at this restoration site through a stagger of years and can be used accordingly.
The dataset comprises of a biological and a spatial component. Biological data: This was collated from several sources, collected over the period 2000-2009. Data are lists of presence-absence of 215 native plant species (i.e., exotic species removed) from 76 seasonal wetlands (size range 0.5 - 35 ha) located on the Fleurieu Peninsula, South Australia (centred on latitude 35.5 °S). After data were collated into a single dataset, sampling bias was removed to create a dataset of near-complete census wetlands. Spatial data: For each of the 76 wetlands a small amount of spatial data is also provided, i.e., area, centroids, catchment etc. The dataset could be of interest for any typical community data analysis (e.g. beta diversity, similarity, assembly)- provided only native wetland plant species are of interest. Data presented here were used to model extinction risk, species-area relationships, occupancy distributions and so on.
The dataset contains biological data collected 2005, 2012 as part of the Tanami Regional Biodiversity Monitoring (Tanami RBM) program. The Tanami RBM program uses 89 sites across the Tanami region, central-west Northern Territory. At these sites, flora and fauna are surveyed during the late-dry (usually November-December) or late-wet (usually February-March) seasons. Each site comprises a 200 m x 300 m survey plot from which the data are recorded using various survey methods: site descriptions, vegetation transects, bird surveys, small vertebrate trapping, and tracking surveys. This dataset contains the data from eight surveys undertaken between 2005 and 2012: six in the late-dry and two in the late-wet seasons. The precision of site locations has been reduced to 0.1 decimal degree, which is approximately 10 km at the study region. This denaturing is because some sites contain threatened and/or sensitive species that might be at risk from collection or disturbance. The dataset contains species information from vegetation surveys and fauna species captures and observations. The data can be used to:  Review the outcomes of the survey methodologies  Presence data of the species recorded  Impacts of mining on the region's flora and fauna e.g. what is the spatial and temporal impact of mining activities on biota?  Conservation and biodiversity e.g. what are the spatial and temporal trends in the occurrence of key/threatened species? How do land units/systems change over time?
This dataset contains information on vegetation at a set of field sites along with associated environmental data extracted from spatial layers and selected ecological statistics. Measurements of vascular plants include species, growth form, height and cover from 1010 point intercepts per plot as well as systematically recorded absences, which are useful for predictive modelling and validation of remote sensing applications. The derived cover estimates are robust and repeatable, allowing comparisons among environments and detection of modest change. The field plots span a rainfall gradient of 129-1437 mm Mean Annual Precipitation ranging from aseasonal to highly seasonal. The dataset consists of a processed version the AusPlots Rangelands dataset with three components: 1) a site table with locality, environmental and summary ecology statistics for each plot; 2) a set of compiled point intercept records identified by individual hits, site visits and plots and; 3) a processed species percent cover against site/visit matrix for ecological analysis. The data have re-use potential for studies on vegetation properties in the Australian rangelands or as a species presence/absence dataset for testing ecological models. The dataset also provides opportunities for generic application such as testing community ecology theories or developing or demonstrating community ecology software, whether using the raw point by point intercept data or the derived percent cover matrix.