Cape Tribulation Flux Data Release 2024_v2
<br>This release consists of flux tower measurements of the exchange of energy and mass between the surface and the atmospheric boundary-layer using eddy covariance techniques. Data were processed using PyFluxPro (v3.4.17) as described by Isaac et al. (2017). PyFluxPro produces a final, gap-filled product with Net Ecosystem Exchange (NEE) partitioned into Gross Primary Productivity (GPP) and Ecosystem Respiration (ER).</br>
<br>The Cape Tribulation flux station was located in the land that is adjacent to the Daintree National Park which is part of the Wet Tropics World Heritage Area (WTWHA). The site is flanked to the west by coastal ranges rising to more than 1400 m and to the east by the Coral Sea. The red clay loam podzolic soils are of metamorphic origin and have good drainage characteristics. The metamorphic rocks grade into granite boulders along Thompson Creek which runs along the northern boundary of the site. The crane site itself is gently sloping but the fetch area makes the site one of very complex terrain. The forest is classed as complex mesophyll vine forest (type 1a) and has an average canopy height of 25m. The dominant canopy trees belong to the <i>Apocynaceae</i>, <i>Arecaceae</i>, <i>Euphorbiaceae</i>, <i>Lauraceae</i>, <i>Meliaceae</i>, <i>Myristicaceae</i> and <i>Myrtaceae</i> families. The forest is continuous for several kilometres around the crane except for an area 300 m due east of the crane, which is regrowth forest. Annual average rainfall at the site is around 5180 mm and is strongly seasonal, with 66% falling between January and April (wet season). Mean daily temperature ranges from 26.6 °C in February to 21.2 °C in July. </br>
<br> Tropical cyclones are a frequent occurrence in Far North Queensland. These severe tropical storm systems are natural phenomena which play a major role in determining the ecology of Queensland's tropical lowland rainforests. In March 1999 Tropical Cyclone Rona (Category 3) passed over the Cape Tribulation area causing widespread damage (gusts >170 km/h). At the site several large trees fell, nearly all of the remaining trees were stripped of leaves and the lianas towers were torn to ground level. </br>
<br> The flux station was mounted at the 45 m level on the tower of the Australian Canopy Crane external link. The canopy crane is a Liebherr 91 EC, freestanding construction tower crane. The crane is 48.5 m tall with a radius of 55 m enabling access to 1 hectare of rainforest. Fluxes of heat, water vapour and carbon dioxide were measured using the open-path eddy covariance technique. Supplementary measurements above the canopy included temperature, humidity, rainfall, total solar; these measurements have continued post the flux system decommissioning. Heat flux, soil temperature and water content (time domain reflectometry) were measured in proximity to the flux station; these measurements have continued post the flux system decommissioning. Detailed biometric measurements are made at the crane site and all trees have regular (5 yearly) dbh measurements and canopy mapping carried out. Monitoring bores (3) are located on site. Leaf litter measurements are carried out on a monthly basis.
Simple
Identification info
- Date (Creation)
- 2024-09-09
- Date (Publication)
- 2024-10-04
- Date (Revision)
- 2024-10-04
- Edition
- 2024_v2
Identifier
Publisher
Author
Co-author
- Website
- https://www.tern.org.au/
- Purpose
- The purpose of the Cape Tribulation flux station is to:<ul style="list-style-type: disc;"> <li>measure exchanges of carbon dioxide, water vapour and energy between the tropical rainforest and the atmosphere using micrometeorological techniques</li> <li>quantify the changes in carbon and energy balances of an Australian tropical rainforest during the course of post-cyclone canopy recovery. Closely linked to the micrometeorological ecosystem-level studies are leaf-level studies of the major tree and liana species at the site (Dr Owen Atkin, ANU; Dr Peter Hietz, Vienna) and water balance and soil carbon studies (Drs P. Nelson, Marc Le Blanc, JCU)</li> <li>recommend management strategies for the conservation of carbon stores in tropical rainforest ecosystems that are subject to relatively frequent cyclone disturbance. </li></ul>
- Credit
- We at TERN acknowledge the Traditional Owners and Custodians throughout Australia, New Zealand and all nations. We honour their profound connections to land, water, biodiversity and culture and pay our respects to their Elders past, present and emerging.
- Credit
- <br>The Cape Tribulation flux station is managed by the James Cook University as part of the TERN (DIISR funded) FNQ Rainforest Supersite. Equipment was provided by grants from the ARC external link (RIEFP) and JCU. </br> Past support was from the Rainforest CRC and Department of Environment and Heritage - Marine and Tropical Sciences Research Facility Project 5ii.2. Climate Change: Scaling from trees to ecosystems.
- Status
- Completed
Point of contact
- Topic category
-
- Climatology, meteorology, atmosphere
Extent
- Description
- Daintree Rainforest Observatory, Cape Tribulation, Queensland.
Temporal extent
- Time period
- 2010-01-01 2018-11-02
- Title
- Beringer J., Hutley L. B., McHugh I., Arndt S. K., Campbell D., Cleugh H. A., Cleverly J., Resco de Dios V., Eamus D., Evans B., Ewenz C., Grace P., Griebel A., Haverd V., Hinko-Najera N., Huete A., Isaac P., Kanniah K., Leuning R., Liddell M. J., Macfarlane C., Meyer W., Moore C., Pendall E., Phillips A., Phillips R. L., Prober S. M., Restrepo-Coupe N., Rutledge S., Schroder I., Silberstein R., Southall P., Yee M. S., Tapper N. J., van Gorsel E., Vote C., Walker J. and Wardlaw T. (2016). An introduction to the Australian and New Zealand flux tower network - OzFlux, Biogeosciences, 13: 5895-5916
- Maintenance and update frequency
- Biannually
- GCMD Science Keywords
-
- BIOGEOCHEMICAL PROCESSES
- LAND PRODUCTIVITY
- EVAPOTRANSPIRATION
- TERRESTRIAL ECOSYSTEMS
- ATMOSPHERIC PRESSURE MEASUREMENTS
- TURBULENCE
- WIND SPEED
- WIND DIRECTION
- TRACE GASES/TRACE SPECIES
- ATMOSPHERIC CARBON DIOXIDE
- PHOTOSYNTHETICALLY ACTIVE RADIATION
- LONGWAVE RADIATION
- SHORTWAVE RADIATION
- INCOMING SOLAR RADIATION
- HEAT FLUX
- AIR TEMPERATURE
- PRECIPITATION AMOUNT
- HUMIDITY
- SOIL MOISTURE/WATER CONTENT
- SOIL TEMPERATURE
- ANZSRC Fields of Research
- TERN Platform Vocabulary
- TERN Instrument Vocabulary
- TERN Parameter Vocabulary
-
- wind speed
- Meter per Second
- enhanced vegetation index
- Unitless
- net ecosystem productivity
- Micromoles per square metre second
- surface net downward radiative flux
- Watt per Square Meter
- magnitude of surface downward stress
- Kilograms per metre per square second
- wind from direction
- Degree
- surface upward flux of available energy
- Watt per Square Meter
- surface upwelling longwave flux in air
- Watt per Square Meter
- volume fraction of condensed water in soil
- Cubic Meter per Cubic Meter
- water vapor partial pressure in air
- Kilopascal
- air temperature
- degree Celsius
- Monin-Obukhov length
- Meter
- soil temperature
- degree Celsius
- surface upward mole flux of carbon dioxide
- Micromoles per square metre second
- vertical wind
- Meter per Second
- surface upwelling shortwave flux in air
- Watt per Square Meter
- specific humidity saturation deficit in air
- Kilogram per Kilogram
- mole fraction of carbon dioxide in air
- Micromoles per mole
- specific humidity
- Kilogram per Kilogram
- downward heat flux at ground level in soil
- Watt per Square Meter
- surface downwelling longwave flux in air
- Watt per Square Meter
- net ecosystem exchange
- Micromoles per square metre second
- longitudinal component of wind speed
- Meter per Second
- water vapor saturation deficit in air
- Kilopascal
- surface friction velocity
- Meter per Second
- relative humidity
- Percent
- surface upward sensible heat flux
- Watt per Square Meter
- water evapotranspiration flux
- Kilograms per square metre per second
- surface upward latent heat flux
- Watt per Square Meter
- lateral component of wind speed
- Meter per Second
- gross primary productivity
- Micromoles per square metre second
- mole fraction of water vapor in air
- Millimoles per mole
- surface downwelling photosynthetic photon flux in air
- Millimoles per square metre second
- ecosystem respiration
- Micromoles per square metre second
- surface downwelling shortwave flux in air
- Watt per Square Meter
- mass concentration of water vapor in air
- Gram per Cubic Meter
- surface air pressure
- Kilopascal
- thickness of rainfall amount
- Millimetre
- QUDT Units of Measure
-
- Meter per Second
- Unitless
- Micromoles per square metre second
- Watt per Square Meter
- Kilograms per metre per square second
- Degree
- Watt per Square Meter
- Watt per Square Meter
- Cubic Meter per Cubic Meter
- Kilopascal
- degree Celsius
- Meter
- degree Celsius
- Micromoles per square metre second
- Meter per Second
- Watt per Square Meter
- Kilogram per Kilogram
- Micromoles per mole
- Kilogram per Kilogram
- Watt per Square Meter
- Watt per Square Meter
- Micromoles per square metre second
- Meter per Second
- Kilopascal
- Meter per Second
- Percent
- Watt per Square Meter
- Kilograms per square metre per second
- Watt per Square Meter
- Meter per Second
- Micromoles per square metre second
- Millimoles per mole
- Millimoles per square metre second
- Micromoles per square metre second
- Watt per Square Meter
- Gram per Cubic Meter
- Kilopascal
- Millimetre
- GCMD Horizontal Resolution Ranges
- GCMD Temporal Resolution Ranges
- Keywords (Discipline)
-
- mesophyll vine forest
- AU-Ctr
Resource constraints
- Use limitation
- The Creative Commons Attribution 4.0 International (CC BY 4.0) license allows others to copy, distribute, display, and create derivative works provided that they credit the original source and any other nominated parties. Details are provided at https://creativecommons.org/licenses/by/4.0/
- File name
- 88x31.png
- File description
- CCBy Logo from creativecommons.org
- File type
- png
- Title
- Creative Commons Attribution 4.0 International Licence
- Alternate title
- CC-BY
- Edition
- 4.0
- Access constraints
- License
- Use constraints
- Other restrictions
- Other constraints
- TERN services are provided on an “as-is” and “as available” basis. Users use any TERN services at their discretion and risk. They will be solely responsible for any damage or loss whatsoever that results from such use including use of any data obtained through TERN and any analysis performed using the TERN infrastructure. <br /><br />Web links to and from external, third party websites should not be construed as implying any relationships with and/or endorsement of the external site or its content by TERN.<br /><br />Please advise any work or publications that use this data via the online form at https://www.tern.org.au/research-publications/#reporting
- Other constraints
- <br>Please cite this dataset as {Author} ({PublicationYear}). {Title}. {Version, as appropriate}. Terrestrial Ecosystem Research Network. Dataset. {Identifier}.</br>
Resource constraints
- Classification
- Unclassified
- Environment description
- <br>File naming convention</br> <br>The NetCDF files follow the naming convention below:</br> <br>SiteName_ProcessingLevel_FromDate_ToDate_Type.nc<ul style="list-style-type: disc;"> <li>SiteName: short name of the site</li> <li>ProcessingLevel: file processing level (L3, L4, L5, L6) </li> <li>FromDate: temporal interval (start), YYYYMMDD</li> <li>ToDate: temporal interval (end), YYYYMMDD</li> <li>Type (Level 6 only): Summary, Monthly, Daily, Cumulative, Annual</li></ul> For the NetCDF files at Level 6 (L6), there are several additional 'aggregated' files. For example: <ul style="list-style-type: disc;"> <li>Summary: This file is a summary of the L6 data for daily, monthly, annual and cumulative data. The files Monthly to Annual below are combined together in one file.</li> <li>Monthly: This file shows L6 monthly averages of the respective variables, e.g. AH, Fc, NEE, <em>etc.</em></li> <li>Daily: same as Monthly but with daily averages.</li> <li>Cumulative: File showing cumulative values for ecosystem respiration, evapo-transpiration, gross primary productivity, net ecosystem exchange and production as well as precipitation.</li> <li>Annual: same as Monthly but with annual averages.</li></ul>
Distribution Information
Distributor
Distributor
- Distribution format
-
- OnLine resource
- NetCDF files (2024_v2)
- OnLine resource
- ro-crate-metadata.json
Data quality info
- Hierarchy level
- Dataset
- Other
- <br>Processing levels</br> <br>Under each of the data release directories, the netcdf files are organised by processing levels (L3, L4, L5 and L6):<ul style="list-style-type: disc;"> <li>L3 (Level 3) processing applies a range of quality assurance/quality control measures (QA/QC) to the L1 data. The variable names are mapped to the standard variable names (CF 1.8) as part of this step. The L3 netCDF file is then the starting point for all further processing stages.</li> <li>L4 (Level 4) processing fills gaps in the radiation, meteorological and soil quantities utilising AWS (automated weather station), ACCESS-G (Australian Community Climate and Earth-System Simulator) and ERA5 (the fifth generation ECMWF atmospheric reanalysis of the global climate).</li> <li>L5 (Level 5) processing fills gaps in the flux data employing the artificial neural network SOLO (self-organising linear output map).</li> <li>L6 (Level 6) processing partitions the gap-filled NEE into GPP and ER.</li></ul> Each processing level has two sub-folders ‘default’ and ‘site_pi’:<ul style="list-style-type: disc;"> <li>default: contains files processed using PyFluxPro</li> <li>site_pi: contains files processed by the principal investigators of the site.</li></ul> If the data quality is poor, the data is filled from alternative sources. Filled data can be identified by the Quality Controls flags in the dataset. Quality control checks include: <ul style="list-style-type: disc;"> <li>range checks for plausible limits</li> <li>spike detection</li> <li>dependency on other variables</li> <li>manual rejection of date ranges</li></ul> Specific checks applied to the sonic and IRGA data include rejection of points based on the sonic and IRGA diagnostic values and on either automatic gain control (AGC) or CO<sub>2</sub> and H<sub>2</sub>O signal strength, depending upon the configuration of the IRGA.</br> <br> Cape Tribulation Flux Tower was established in January 2010, and stopped measuring in November 2018. The processed data release is currently ongoing, biannually.</br> <br></br>
- Title
- Isaac P., Cleverly J., McHugh I., van Gorsel E., Ewenz C. and Beringer, J. (2017). OzFlux data: network integration from collection to curation, Biogeosciences, 14: 2903-2928
- Abstract
- Isaac P., Cleverly J., McHugh I., van Gorsel E., Ewenz C. and Beringer, J. (2017). OzFlux data: network integration from collection to curation, Biogeosciences, 14: 2903-2928
Resource lineage
- Statement
- All flux raw data is subject to the quality control process OzFlux QA/QC to generate data from L1 to L6. Levels 3 to 6 are available for re-use. Datasets contain Quality Controls flags which will indicate when data quality is poor and has been filled from alternative sources. For more details, refer to Isaac et al. (2017).
- Hierarchy level
- Dataset
- Title
- Isaac P., Cleverly J., McHugh I., van Gorsel E., Ewenz C. and Beringer, J. (2017). OzFlux data: network integration from collection to curation, Biogeosciences, 14: 2903-2928
- Website
-
https://doi.org/10.5194/bg-14-2903-2017
Method documentation
- Title
- PyFluxPro
- Website
-
https://github.com/OzFlux/PyFluxPro/wiki
Method documentation
Reference System Information
- Reference system identifier
- EPSG/EPSG:4326
- Reference system type
- Geodetic Geographic 2D
Metadata
- Metadata identifier
-
urn:uuid/8443c926-2145-439d-bd66-208be4393159
- Title
- TERN GeoNetwork UUID
- Language
- English
- Character encoding
- UTF8
Point of contact
- Title
- Cape Tribulation Flux Data Collection
Identifier
- Codespace
- https://geonetwork.tern.org.au/geonetwork/srv/eng/catalog.search#/metadata/
- Description
- Parent Metadata Record
Type of resource
- Resource scope
- Dataset
- Metadata linkage
-
https://geonetwork.tern.org.au/geonetwork/srv/eng/catalog.search#/metadata/8443c926-2145-439d-bd66-208be4393159
Point-of-truth metadata URL
- Date info (Creation)
- 2022-03-17T00:00:00
- Date info (Revision)
- 2024-10-04T00:00:00
Metadata standard
- Title
- ISO 19115-1:2014/AMD 1:2018 Geographic information - Metadata - Fundamentals
- Edition
- 1
Metadata standard
- Title
- ISO/TS 19115-3:2016
- Edition
- 1.0
Metadata standard
- Title
- ISO/TS 19157-2:2016
- Edition
- 1.0
- Title
- Terrestrial Ecosystem Research Network (TERN) Metadata Profile of ISO 19115-3:2016 and ISO 19157-2:2016
- Date (published)
- 2021
- Edition
- 1.0